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1

Cytoscape stringApp: Network analysis and visualization of proteomics data

Doncheva, Nadezhda T., Morris, John, Gorodkin, Jan, Jensen, Lars J.

Journal:

Journal of Proteome Research

Year:

2018

Language:

english

File:

PDF, 7.61 MB

english, 2018

2

Magnetorheological control of heat transfer

W.I. Kordonsky, S.P. Gorodkin, S.A. Demchuk

Journal:

International Journal of Heat and Mass Transfer

Year:

1993

Language:

english

File:

PDF, 668 KB

english, 1993

3

Coexistence of systemic sclerosis and multiple sclerosis

R. Gorodkin, B. Leahy, D. Neary, A. L. Herrick

Journal:

Journal of Neurology

Year:

2004

Language:

english

File:

PDF, 106 KB

english, 2004

4

Material removal in magnetorheological finishing of optics

Kordonski, William, Gorodkin, Sergei

Journal:

Year:

2011

Language:

english

File:

PDF, 1.09 MB

english, 2011

5

Using magnetorheological methods to process optical items on a series of automated polishing–lapping machines

Gleb, L. K., Gorshkov, V. A., Khlebnikov, F. P., Gorodkin, G. R., Semenov, E. V.

Journal:

Journal of Optical Technology

Year:

2011

Language:

english

File:

PDF, 339 KB

english, 2011

6

Magnetorheological Finishing

KORDONSKY, W. I., PROKHOROV, I. V., GORODKIN, G., JACOBS, S. D., PUCHEBNER, B., PIETROWSKI, D.

Journal:

Optics and Photonics News

Year:

1993

Language:

english

File:

PDF, 615 KB

english, 1993

7

Magnetorheological Fluid-Based Seal

Kordonski, W. I., Gorodkin, S. R.

Journal:

Journal of Intelligent Material Systems and Structures

Year:

1996

File:

PDF, 498 KB

1996

8

From Structure Prediction to Genomic Screens for Novel Non-Coding RNAs

Gorodkin, Jan, Hofacker, Ivo L., Levitt, Michael

Journal:

PLoS Computational Biology

Year:

2011

Language:

english

File:

PDF, 870 KB

english, 2011

9

Magnetorheological polishing of optical surfaces

Kordonskiĭ, V. I., Gorodkin, S. R.

Journal:

Journal of Optical Technology

Year:

2012

Language:

english

File:

PDF, 1.34 MB

english, 2012

10

RAIN: RNA–protein Association and Interaction Networks

Junge, Alexander, Refsgaard, Jan C., Garde, Christian, Pan, Xiaoyong, Santos, Alberto, Alkan, Ferhat, Anthon, Christian, von Mering, Christian, Workman, Christopher T., Jensen, Lars Juhl, Gorodkin, Ja

Journal:

Year:

2017

Language:

english

File:

PDF, 761 KB

english, 2017

11

CellBench: R/Bioconductor software for comparing single-cell RNA-seq analysis methods

Su, Shian, Tian, Luyi, Dong, Xueyi, Hickey, Peter F, Freytag, Saskia, Ritchie, Matthew E, Gorodkin, Jan

Journal:

Year:

2019

Language:

english

File:

PDF, 1.28 MB

english, 2019

12

CellBench: R/Bioconductor software for comparing single-cell RNA-seq analysis methods

Su, Shian, Tian, Luyi, Dong, Xueyi, Hickey, Peter F, Freytag, Saskia, Ritchie, Matthew E, Gorodkin, Jan

Journal:

Year:

2019

File:

PDF, 1.28 MB

2019

13

Comparison of red and green laser doppler imaging of blood flow

Andrea K. Murray, Rachel E. Gorodkin, Tonia L. Moore, Rodney J. Gush, Ariane L. Herrick, Terence A. King

Journal:

Lasers in Surgery and Medicine

Year:

2004

Language:

english

File:

PDF, 456 KB

english, 2004

14

The electrorheological effect and its possible uses

Z.P. Shulman, R.G. Gorodkin, E.V. Korobko, V.K. Gleb

Journal:

Journal of Non-Newtonian Fluid Mechanics

Year:

1981

Language:

english

File:

PDF, 732 KB

english, 1981

15

Evolutionary rate variation and RNA secondary structure prediction

B. Knudsen, E.S. Andersen, C. Damgaard, J. Kjems, J. Gorodkin

Journal:

Computational Biology and Chemistry

Year:

2004

Language:

english

File:

PDF, 166 KB

english, 2004

16

Comparing two K-category assignments by a K-category correlation coefficient

Journal:

Computational Biology and Chemistry

Year:

2004

Language:

english

File:

PDF, 264 KB

english, 2004

17

MicroRNA sequence motifs reveal asymmetry between the stem arms

J. Gorodkin, J.H. Havgaard, M. Ensterö, M. Sawera, P. Jensen, M. Öhman, M. Fredholm

Journal:

Computational Biology and Chemistry

Year:

2006

Language:

english

File:

PDF, 364 KB

english, 2006

18

Sequence assembly

K. Scheibye-Alsing, S. Hoffmann, A. Frankel, P. Jensen, P.F. Stadler, Y. Mang, N. Tommerup, M.J. Gilchrist, A.-B. Nygård, S. Cirera, C.B. Jørgensen, M. Fredholm, J. Gorodkin

Journal:

Computational Biology and Chemistry

Year:

2009

Language:

english

File:

PDF, 1.24 MB

english, 2009

19

Recognition of environmental and genetic effects on barley phenolic fingerprints by neural networks

Jan Gorodkin, Bodil Søgaard, Hanne Bay, Hans Doll, Per Kølster, Søren Brunak

Journal:

Computers & Chemistry

Year:

2001

Language:

english

File:

PDF, 100 KB

english, 2001

20

Orbits of Boolean functions

Journal:

Discrete Applied Mathematics

Year:

1997

Language:

english

File:

PDF, 434 KB

english, 1997

21

Hierarchical folding of multiple sequence alignments for the prediction of structures and RNA-RNA interactions

Stefan E Seemann, Andreas S Richter, Jan Gorodkin, Rolf Backofen

Journal:

Algorithms for Molecular Biology

Year:

2010

Language:

english

File:

PDF, 4.21 MB

english, 2010

22

Fast local fragment chaining using sum-of-pair gap costs

Christian Otto, Steve Hoffmann, Jan Gorodkin, Peter F Stadler

Journal:

Algorithms for Molecular Biology

Year:

2011

Language:

english

File:

PDF, 423 KB

english, 2011

23

Mechanical behavior of electroviscous nonaqueous disperse systems in shear flow in a transverse electric field

A. V. Lykov, Z. P. Shul'man, R. G. Gorodkin, A. D. Matsepuro

Journal:

Journal of Engineering Physics and Thermophysics

Year:

1970

Language:

english

File:

PDF, 571 KB

english, 1970

24

Effect of the material properties of a dielectric specimen on the electrorheological stabilization force

Z. P. Shul'man, R. G. Gorodkin, V. M. Nosov, T. A. Demidenko

Journal:

Journal of Engineering Physics and Thermophysics

Year:

1973

Language:

english

File:

PDF, 236 KB

english, 1973

25

Rheology Symposium

R. G. Gorodkin, A. D. Matsepuro

Journal:

Journal of Engineering Physics and Thermophysics

Year:

1969

Language:

english

File:

PDF, 226 KB

english, 1969

26

Study of electrorheological effect

A. V. Lykov, R. G. Gorodkin, Z. P. Shul'man

Journal:

Journal of Engineering Physics and Thermophysics

Year:

1968

Language:

english

File:

PDF, 207 KB

english, 1968

27

Some factors affecting the rotation of a dielectric in an electrorheological medium

Z. P. Shul'man, R. G. Gorodkin, V. A. Kuz'min

Journal:

Journal of Engineering Physics and Thermophysics

Year:

1972

Language:

english

File:

PDF, 208 KB

english, 1972

28

Energy dissipation and heat exchange in magnetorheological suspensions in a rotating magnetic field

Z. P. Shul'man, V. I. Kordonskii, S. R. Gorodkin, B. É. Kashevskii, I. V. Prokhorov

Journal:

Journal of Engineering Physics and Thermophysics

Year:

1987

Language:

english

File:

PDF, 464 KB

english, 1987

29

A recuperator with a magnetorheological coolant

Z. P. Shul'man, V. I. Kordonskii, S. R. Gorodkin

Journal:

Journal of Engineering Physics and Thermophysics

Year:

1989

Language:

english

File:

PDF, 342 KB

english, 1989

30

Spreading of a drop of an electrorheological suspension in an external field

E. V. Korobko, R. G. Gorodkin, V. V. Mel'nichenko

Journal:

Journal of Engineering Physics and Thermophysics

Year:

1997

Language:

english

File:

PDF, 386 KB

english, 1997

31

Modification of the adsorption properties of the dispersed phase of magnetorheological liquids

S. R. Gorodkin, V. N. Makatun, S. V. Matveichuk, Z. A. Novikova

Journal:

Journal of Engineering Physics and Thermophysics

Year:

2000

Language:

english

File:

PDF, 413 KB

english, 2000

32

Mapping and expression studies of the mir17-92 cluster on pig Chromosome 11

Milena Sawera, Jan Gorodkin, Susanna Cirera, Merete Fredholm

Journal:

Mammalian Genome

Year:

2005

Language:

english

File:

PDF, 169 KB

english, 2005

33

Sedimentation constant of magnetorheological liquids

S. R. Gorodkin, V. I. Kordonskii, E. V. Medvedeva, Z. A. Novikova

Journal:

Journal of Engineering Physics and Thermophysics

Year:

2000

Language:

english

File:

PDF, 366 KB

english, 2000

34

Mechanical properties of a colloidal body in the process of its transformation into a capillary-porous one as a result of drying

V. A. Mansurov, V. A. Bilyk, G. P. Gorodkin

Journal:

Journal of Engineering Physics and Thermophysics

Year:

2008

Language:

english

File:

PDF, 161 KB

english, 2008

35

Linkage mapping of gene-associated SNPs to pig chromosome 11

M. Sawera, S. Cirera, C. B. Jørgensen, J. Gorodkin, M. Fredholm

Journal:

Animal Genetics

Year:

2006

Language:

english

File:

PDF, 103 KB

english, 2006

36

Identification of 10 882 porcine microsatellite sequences and virtual mapping of 4528 of these sequences

P. Karlskov-Mortensen, Z. L. Hu, J. Gorodkin, J. M. Reecy, M. Fredholm

Journal:

Animal Genetics

Year:

2007

Language:

english

File:

PDF, 534 KB

english, 2007

37

SNP-finding in pig mitochondrial ESTs

K. Scheibye-Alsing, S. Cirera, M. J. Gilchrist, M. Fredholm, J. Gorodkin

Journal:

Animal Genetics

Year:

2008

Language:

english

File:

PDF, 125 KB

english, 2008

38

Physical properties of magnetizable structure-reversible media

V.I. Kordonsky, Z.P. Shulman, S.R. Gorodkin, S.A. Demchuk, I.V. Prokhorov, E.A. Zaltsgendler, B.M. Khusid

Journal:

Journal of Magnetism and Magnetic Materials

Year:

1990

Language:

english

File:

PDF, 655 KB

english, 1990

39

De novo prediction of structured RNAs from genomic sequences

Jan Gorodkin, Ivo L. Hofacker, Elfar Torarinsson, Zizhen Yao, Jakob H. Havgaard, Walter L. Ruzzo

Journal:

Trends in Biotechnology

Year:

2010

Language:

english

File:

PDF, 795 KB

english, 2010

40

454 pyrosequencing based transcriptome analysis ofZygaena filipendulaewith focus on genes involved in biosynthesis of cyanogenic glucosides

Mika Zagrobelny, Karsten Scheibye-Alsing, Niels Bjerg Jensen, Lindberg Birger Møller, Jan Gorodkin, Søren Bak

Journal:

Year:

2009

Language:

english

File:

PDF, 1.10 MB

english, 2009

41

Pigs in sequence space: A 0.66X coverage pig genome survey based on shotgun sequencing

Rasmus Wernersson, Mikkel H Schierup, Frank G Jørgensen, Jan Gorodkin, Frank Panitz, Hans-Henrik Stærfeldt, Ole F Christensen, Thomas Mailund, Henrik Hornshøj, Ami Klein, Jun Wang, Bin Liu, Songnian H

Journal:

Year:

2005

Language:

english

File:

PDF, 262 KB

english, 2005

42

EST analysis on pig mitochondria reveal novel expression differences between developmental and adult tissues

Karsten Scheibye-Alsing, Susanna Cirera, Michael J Gilchrist, Merete Fredholm, Jan Gorodkin

Journal:

Year:

2007

Language:

english

File:

PDF, 1.12 MB

english, 2007

43

Detection of RNA structures in porcine EST data and related mammals

Stefan E Seemann, Michael J Gilchrist, Ivo L Hofacker, Peter F Stadler, Jan Gorodkin

Journal:

Year:

2007

Language:

english

File:

PDF, 849 KB

english, 2007

44

A study of alternative splicing in the pig

Ann-Britt Nygard, Susanna Cirera, Michael J Gilchrist, Jan Gorodkin, Claus B Jørgensen, Merete Fredholm

Journal:

BMC Research Notes

Year:

2010

Language:

english

File:

PDF, 796 KB

english, 2010

45

Minimizing artifact formation in magnetorheological finishing of chemical vapor deposition ZnS flats

Kozhinova, Irina A., Romanofsky, Henry J., Maltsev, Alexander, Jacobs, Stephen D., Kordonski, William I., Gorodkin, Sergei R.

Journal:

Year:

2005

Language:

english

File:

PDF, 452 KB

english, 2005

46

Global microRNA Analysis of the NCI-60 Cancer Cell Panel

Sokilde, R., Kaczkowski, B., Podolska, A., Cirera, S., Gorodkin, J., Moller, S., Litman, T.

Journal:

Molecular Cancer Therapeutics

Year:

2011

Language:

english

File:

PDF, 1.28 MB

english, 2011

47

RNA Interactions in the 5′ Region of the HIV-1 Genome

Christian Kroun Damgaard, Ebbe Sloth Andersen, Bjarne Knudsen, Jan Gorodkin, Jørgen Kjems

Journal:

Journal of Molecular Biology

Year:

2004

Language:

english

File:

PDF, 1.57 MB

english, 2004

48

Possible therapeutic use of vasodilator iontophoresis

Andrea K. Murray, Ariane L. Herrick, Rachel E. Gorodkin, Tonia L. Moore, Terence A. King

Journal:

Microvascular Research

Year:

2005

Language:

english

File:

PDF, 222 KB

english, 2005

49

A high-resolution comparative map between pig chromosome 17 and human chromosomes 4, 8, and 20: Identification of synteny breakpoints

Yvette Lahbib-Mansais, Peter Karlskov-Mortensen, Florence Mompart, Denis Milan, Claus B. Jørgensen, Susanna Cirera, Jan Gorodkin, Thomas Faraut, Martine Yerle, Merete Fredholm

Journal:

Year:

2005

Language:

english

File:

PDF, 464 KB

english, 2005

50

Brief Report: Shortened Telomere Length in Patients With Systemic Lupus Erythematosus

Haque, Sahena, Rakieh, Chadi, Marriage, Fiona, Ho, Pauline, Gorodkin, Rachel, Teh, Lee Suan, Snowden, Neil, Day, Philip J. R., Bruce, Ian N.

Journal:

Arthritis & Rheumatism

Year:

2013

Language:

english

File:

PDF, 412 KB

english, 2013

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